Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKB55212.1Hypothetical protein. (354 aa)    
Predicted Functional Partners:
EKB55069.1
Hypothetical protein.
 
 0.956
EKB55070.1
Hypothetical protein.
 
 0.955
EKB55214.1
Hypothetical protein.
 
 
 0.942
EKB55213.1
Hypothetical protein.
 
 
 0.933
potA
Polyamine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
  
  
 
0.916
EKB56251.1
Hypothetical protein.
 
 
 0.818
EKB56252.1
Hypothetical protein.
 
 
 0.787
EKB55215.1
Hypothetical protein.
       0.748
EKB54680.1
Hypothetical protein.
 
 
 0.734
EKB54702.1
Hypothetical protein.
 
    
0.722
Your Current Organism:
Facklamia hominis
NCBI taxonomy Id: 883111
Other names: F. hominis CCUG 36813, Facklamia hominis CCUG 36813
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