Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKB54639.1Hypothetical protein. (251 aa)    
Predicted Functional Partners:
EKB54643.1
Hypothetical protein.
 
  
 0.837
EKB54642.1
Hypothetical protein.
 
  
 0.824
EKB54641.1
Hypothetical protein.
 
  
 0.810
EKB54640.1
Hypothetical protein.
       0.752
EKB54644.1
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
   
 0.721
EKB54638.1
Nucleotide sugar dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
  
 0.657
EKB54637.1
Hypothetical protein.
       0.601
EKB56327.1
Hypothetical protein.
  
 0.552
EKB54647.1
Hypothetical protein.
 
  
 0.547
EKB54726.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.486
Your Current Organism:
Facklamia hominis
NCBI taxonomy Id: 883111
Other names: F. hominis CCUG 36813, Facklamia hominis CCUG 36813
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