Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKB54812.1Hypothetical protein. (404 aa)    
Predicted Functional Partners:
EKB54813.1
Hypothetical protein.
 
 0.999
EKB54814.1
Hypothetical protein.
 
 
 0.998
EKB53472.1
Hypothetical protein.
 
 0.974
EKB55098.1
Hypothetical protein.
 
 0.968
EKB55129.1
Hypothetical protein.
 
 0.959
EKB55133.1
Hypothetical protein.
 
 0.956
EKB53558.1
Hypothetical protein.
 
 0.945
EKB56442.1
Hypothetical protein.
 
 
 0.941
EKB53996.1
Hypothetical protein.
 
 
 0.906
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
   
 0.827
Your Current Organism:
Facklamia hominis
NCBI taxonomy Id: 883111
Other names: F. hominis CCUG 36813, Facklamia hominis CCUG 36813
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