STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKB55098.1Hypothetical protein. (229 aa)    
Predicted Functional Partners:
EKB54812.1
Hypothetical protein.
 0.978
EKB55097.1
Hypothetical protein.
 
   0.966
EKB55134.1
Hypothetical protein.
 
   0.831
EKB55099.1
Hypothetical protein.
 
     0.829
EKB53399.1
Hypothetical protein; Belongs to the ABC transporter superfamily.
 
    
0.745
EKB55155.1
Hypothetical protein.
 
     0.744
EKB55130.1
Hypothetical protein.
 
   0.727
EKB54521.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain; Belongs to the ABC transporter superfamily.
 
     
0.655
EKB53995.1
Hypothetical protein.
 
   0.652
EKB55030.1
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region.
  
 0.647
Your Current Organism:
Facklamia hominis
NCBI taxonomy Id: 883111
Other names: F. hominis CCUG 36813, Facklamia hominis CCUG 36813
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.