STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHR36427.1Lipoyltransferase and lipoate-protein ligase. (305 aa)    
Predicted Functional Partners:
EHR36426.1
Dihydrolipoyl dehydrogenase.
 
 0.999
EHR32666.1
Dihydrolipoyl dehydrogenase.
 
 0.999
EHR32669.1
Hypothetical protein.
 
 
 0.951
EHR32670.1
Hypothetical protein.
  
 
 0.935
prs
Ribose-phosphate diphosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
   
 
 0.911
EHR32667.1
Hypothetical protein.
 
 0.884
EHR32668.1
Hypothetical protein.
  
 0.851
EHR36428.1
Hypothetical protein.
       0.776
EHR36425.1
Hypothetical protein.
       0.635
EHR32342.1
2-deoxy-D-gluconate 3-dehydrogenase.
   
 
 0.609
Your Current Organism:
Helcococcus kunzii
NCBI taxonomy Id: 883114
Other names: H. kunzii ATCC 51366, Helcococcus kunzii ATCC 51366
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