STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHR35059.1Hypothetical protein. (162 aa)    
Predicted Functional Partners:
EHR35013.1
Chorismate mutase.
    
 0.886
EHR35058.1
Hypothetical protein.
       0.774
EHR35057.1
L-ribulose-5-phosphate 4-epimerase.
  
    0.722
EHR35056.1
Hypothetical protein.
  
    0.659
EHR35992.1
Hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.611
tsaD
Putative glycoprotease GCP; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
 
 0.609
EHR35055.1
Hypothetical protein.
   
   0.608
EHR35519.1
Hypothetical protein.
 
 
 0.586
EHR35060.1
5-methylthioribose kinase.
       0.578
EHR32102.1
Phosphate acetyltransferase.
    
 0.569
Your Current Organism:
Helcococcus kunzii
NCBI taxonomy Id: 883114
Other names: H. kunzii ATCC 51366, Helcococcus kunzii ATCC 51366
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.