STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHR34660.1Hypothetical protein. (354 aa)    
Predicted Functional Partners:
EHR34661.1
Hypothetical protein.
       0.709
EHR33965.1
Hypothetical protein.
  
     0.528
EHR32087.1
S4 domain-containing protein YaaA.
    
 
 0.504
EHR34662.1
Hypothetical protein.
       0.503
EHR34663.1
5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
 
     0.503
EHR34696.1
YhbY family putative RNA-binding protein.
    
 
 0.496
EHR34468.1
Pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family.
    
 
 0.449
EHR33551.1
Pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family.
    
 
 0.449
EHR35655.1
Hypothetical protein.
  
     0.443
rplR
Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.
    
   0.432
Your Current Organism:
Helcococcus kunzii
NCBI taxonomy Id: 883114
Other names: H. kunzii ATCC 51366, Helcococcus kunzii ATCC 51366
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.