STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHR34417.1Hypothetical protein. (469 aa)    
Predicted Functional Partners:
EHR34416.1
Hypothetical protein; Belongs to the SEDS family.
 
 0.999
EHR33299.1
Rod shape-determining protein RodA; Belongs to the SEDS family.
 
 0.990
EHR33983.1
Hypothetical protein; Belongs to the SEDS family.
 
 0.985
EHR34689.1
Hypothetical protein.
  
  
0.978
EHR33986.1
Hypothetical protein.
 
  
0.977
EHR34415.1
Hypothetical protein.
 
   
 0.939
EHR34687.1
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
 
 0.897
EHR33994.1
Hypothetical protein.
 
 
 
 0.768
EHR35794.1
Hypothetical protein; Belongs to the peptidase S11 family.
  
 
 0.765
murF
UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
 
  
 0.762
Your Current Organism:
Helcococcus kunzii
NCBI taxonomy Id: 883114
Other names: H. kunzii ATCC 51366, Helcococcus kunzii ATCC 51366
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.