EHR33904.1 protein (Helcococcus kunzii) - STRING interaction network

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Score

EHR33904.1

Hypothetical protein. (75 aa)

Predicted Functional Partners:

EHR33906.1

0.575

EHR33903.1

0.564

lysS

0.554

greA

0.553

recX

0.545

Your Current Organism:

Helcococcus kunzii

NCBI taxonomy Id: 883114
Other names: H. kunzii ATCC 51366, Helcococcus kunzii ATCC 51366

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EHR33903.1	EHR33904.1	HMPREF9709_00839	HMPREF9709_00840	Hypothetical protein.	Hypothetical protein.	0.564
EHR33903.1	EHR33906.1	HMPREF9709_00839	HMPREF9709_00842	Hypothetical protein.	Hypothetical protein.	0.407
EHR33903.1	greA	HMPREF9709_00839	HMPREF9709_00838	Hypothetical protein.	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	0.768
EHR33903.1	lysS	HMPREF9709_00839	HMPREF9709_00837	Hypothetical protein.	lysine-tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family.	0.768
EHR33903.1	recX	HMPREF9709_00839	HMPREF9709_00841	Hypothetical protein.	Hypothetical protein; Modulates RecA activity; Belongs to the RecX family.	0.439
EHR33904.1	EHR33903.1	HMPREF9709_00840	HMPREF9709_00839	Hypothetical protein.	Hypothetical protein.	0.564
EHR33904.1	EHR33906.1	HMPREF9709_00840	HMPREF9709_00842	Hypothetical protein.	Hypothetical protein.	0.575
EHR33904.1	greA	HMPREF9709_00840	HMPREF9709_00838	Hypothetical protein.	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	0.553
EHR33904.1	lysS	HMPREF9709_00840	HMPREF9709_00837	Hypothetical protein.	lysine-tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family.	0.554
EHR33904.1	recX	HMPREF9709_00840	HMPREF9709_00841	Hypothetical protein.	Hypothetical protein; Modulates RecA activity; Belongs to the RecX family.	0.545
EHR33906.1	EHR33903.1	HMPREF9709_00842	HMPREF9709_00839	Hypothetical protein.	Hypothetical protein.	0.407
EHR33906.1	EHR33904.1	HMPREF9709_00842	HMPREF9709_00840	Hypothetical protein.	Hypothetical protein.	0.575
EHR33906.1	greA	HMPREF9709_00842	HMPREF9709_00838	Hypothetical protein.	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	0.457
EHR33906.1	lysS	HMPREF9709_00842	HMPREF9709_00837	Hypothetical protein.	lysine-tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family.	0.486
EHR33906.1	recX	HMPREF9709_00842	HMPREF9709_00841	Hypothetical protein.	Hypothetical protein; Modulates RecA activity; Belongs to the RecX family.	0.812
greA	EHR33903.1	HMPREF9709_00838	HMPREF9709_00839	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	Hypothetical protein.	0.768
greA	EHR33904.1	HMPREF9709_00838	HMPREF9709_00840	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	Hypothetical protein.	0.553
greA	EHR33906.1	HMPREF9709_00838	HMPREF9709_00842	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	Hypothetical protein.	0.457
greA	lysS	HMPREF9709_00838	HMPREF9709_00837	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	lysine-tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family.	0.819
greA	recX	HMPREF9709_00838	HMPREF9709_00841	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	Hypothetical protein; Modulates RecA activity; Belongs to the RecX family.	0.434