STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHR33955.1DAK2 domain fusion protein YloV. (550 aa)    
Predicted Functional Partners:
EHR34107.1
DegV family EDD domain-containing protein.
 
 0.996
EHR32071.1
DegV family EDD domain-containing protein.
 
 0.996
EHR33956.1
Hypothetical protein.
 
  
 0.985
EHR36323.1
DegV family EDD domain-containing protein.
 
 
 0.970
EHR33954.1
ATP-dependent DNA helicase RecG.
  
    0.843
EHR33951.1
Hypothetical protein.
 
     0.840
coaD
Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
 
     0.840
EHR33953.1
RsmD family RNA methyltransferase.
 
     0.838
rpmB
Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
     
 0.602
polC
DNA polymerase III, alpha subunit, Gram-positive type; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
 
     0.571
Your Current Organism:
Helcococcus kunzii
NCBI taxonomy Id: 883114
Other names: H. kunzii ATCC 51366, Helcococcus kunzii ATCC 51366
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