STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asnAAspartate-ammonia ligase. (337 aa)    
Predicted Functional Partners:
pyrB
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
     
 0.965
carB
Carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family.
     
 0.714
EHR32702.1
Hypothetical protein.
     
 0.712
EHR34709.1
NAD+ synthetase.
    
  0.684
EHR33214.1
Hypothetical protein; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
    
 0.547
EHR34014.1
Hypothetical protein; Belongs to the aldehyde dehydrogenase family.
    
 0.545
EHR34131.1
Mevalonate kinase.
     
 0.520
EHR34836.1
Hypothetical protein.
    
  0.519
EHR34132.1
Hypothetical protein.
       0.505
EHR34133.1
Hypothetical protein.
       0.505
Your Current Organism:
Helcococcus kunzii
NCBI taxonomy Id: 883114
Other names: H. kunzii ATCC 51366, Helcococcus kunzii ATCC 51366
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.