STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHR34140.1Hypothetical protein. (363 aa)    
Predicted Functional Partners:
EHR32678.1
Pullulanase, type I; Belongs to the glycosyl hydrolase 13 family.
    
 0.685
deoD
Purine nucleoside phosphorylase.
    
  0.612
EHR34141.1
Heavy metal translocating P-type ATPase.
       0.503
EHR34139.1
Hypothetical protein.
      
0.452
pyrH
UMP kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
   
 
  0.443
EHR36031.1
Cytidine deaminase.
     
 0.427
EHR34071.1
rdgB/HAM1 family non-canonical purine NTP pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
    
  0.421
EHR34413.1
Pullulanase, type I; Belongs to the glycosyl hydrolase 13 family.
    
 0.410
Your Current Organism:
Helcococcus kunzii
NCBI taxonomy Id: 883114
Other names: H. kunzii ATCC 51366, Helcococcus kunzii ATCC 51366
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