STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHR33540.1Amidohydrolase. (394 aa)    
Predicted Functional Partners:
EHR33538.1
Hypothetical protein.
       0.778
EHR33539.1
Hypothetical protein.
       0.777
EHR33262.1
Putative dipeptidase.
    
 0.674
EHR31948.1
ArgE/DapE family peptidase.
    
 0.674
EHR33537.1
L-serine dehydratase, iron-sulfur-dependent, beta subunit.
       0.651
EHR33536.1
L-serine dehydratase, iron-sulfur-dependent, alpha subunit.
       0.621
EHR35042.1
Phosphoribosylformylglycinamidine synthase.
    
  0.573
EHR34394.1
Hypothetical protein.
  
 
 0.562
EHR35496.1
Cysteine synthase A.
  
 
  0.530
EHR35050.1
Amidohydrolase; Belongs to the peptidase M20A family.
 
     0.493
Your Current Organism:
Helcococcus kunzii
NCBI taxonomy Id: 883114
Other names: H. kunzii ATCC 51366, Helcococcus kunzii ATCC 51366
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.