Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EHR33328.1 | EHR33555.1 | HMPREF9709_01372 | HMPREF9709_01154 | Hypothetical protein. | Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. | 0.841 |
| EHR33328.1 | EHR33986.1 | HMPREF9709_01372 | HMPREF9709_00922 | Hypothetical protein. | Hypothetical protein. | 0.915 |
| EHR33553.1 | EHR33554.1 | HMPREF9709_01152 | HMPREF9709_01153 | Hypothetical protein. | Hypothetical protein. | 0.773 |
| EHR33553.1 | EHR33555.1 | HMPREF9709_01152 | HMPREF9709_01154 | Hypothetical protein. | Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. | 0.558 |
| EHR33553.1 | EHR33556.1 | HMPREF9709_01152 | HMPREF9709_01155 | Hypothetical protein. | Hypothetical protein. | 0.414 |
| EHR33554.1 | EHR33553.1 | HMPREF9709_01153 | HMPREF9709_01152 | Hypothetical protein. | Hypothetical protein. | 0.773 |
| EHR33554.1 | EHR33555.1 | HMPREF9709_01153 | HMPREF9709_01154 | Hypothetical protein. | Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. | 0.548 |
| EHR33554.1 | EHR33556.1 | HMPREF9709_01153 | HMPREF9709_01155 | Hypothetical protein. | Hypothetical protein. | 0.414 |
| EHR33555.1 | EHR33328.1 | HMPREF9709_01154 | HMPREF9709_01372 | Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. | Hypothetical protein. | 0.841 |
| EHR33555.1 | EHR33553.1 | HMPREF9709_01154 | HMPREF9709_01152 | Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. | Hypothetical protein. | 0.558 |
| EHR33555.1 | EHR33554.1 | HMPREF9709_01154 | HMPREF9709_01153 | Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. | Hypothetical protein. | 0.548 |
| EHR33555.1 | EHR33556.1 | HMPREF9709_01154 | HMPREF9709_01155 | Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. | Hypothetical protein. | 0.566 |
| EHR33555.1 | EHR33986.1 | HMPREF9709_01154 | HMPREF9709_00922 | Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. | Hypothetical protein. | 0.544 |
| EHR33555.1 | EHR34415.1 | HMPREF9709_01154 | HMPREF9709_00722 | Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. | Hypothetical protein. | 0.881 |
| EHR33555.1 | EHR34416.1 | HMPREF9709_01154 | HMPREF9709_00723 | Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. | Hypothetical protein; Belongs to the SEDS family. | 0.596 |
| EHR33555.1 | EHR34845.1 | HMPREF9709_01154 | HMPREF9709_00587 | Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. | Hypothetical protein. | 0.514 |
| EHR33555.1 | murA | HMPREF9709_01154 | HMPREF9709_01391 | Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.520 |
| EHR33555.1 | murC | HMPREF9709_01154 | HMPREF9709_00569 | Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. | UDP-N-acetylmuramate-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.571 |
| EHR33556.1 | EHR33553.1 | HMPREF9709_01155 | HMPREF9709_01152 | Hypothetical protein. | Hypothetical protein. | 0.414 |
| EHR33556.1 | EHR33554.1 | HMPREF9709_01155 | HMPREF9709_01153 | Hypothetical protein. | Hypothetical protein. | 0.414 |
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