STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHR33491.1Hypothetical protein. (264 aa)    
Predicted Functional Partners:
EHR33490.1
YbgI/family dinuclear metal center protein.
  
  
 0.917
EHR33973.1
Hypothetical protein; Belongs to the UPF0297 family.
  
     0.758
EHR34668.1
Helicase-exonuclease AddAB, AddA subunit; ATP-dependent DNA helicase.
 
     0.710
EHR34667.1
Hypothetical protein; ATP-dependent DNA helicase.
 
     0.689
EHR33941.1
Sigma-70 family RNA polymerase sigma factor; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.
  
     0.684
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
  
     0.630
EHR36272.1
Hypothetical protein.
  
     0.603
EHR33921.1
Hypothetical protein.
 
     0.528
ybeY
Metalloprotein, YbeY/UPF0054family; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
       0.524
polC
DNA polymerase III, alpha subunit, Gram-positive type; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
 
     0.515
Your Current Organism:
Helcococcus kunzii
NCBI taxonomy Id: 883114
Other names: H. kunzii ATCC 51366, Helcococcus kunzii ATCC 51366
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.