STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHR33213.1Hypothetical protein; Belongs to the glycosyl hydrolase 13 family. (629 aa)    
Predicted Functional Partners:
EHR34067.1
4-alpha-glucanotransferase.
 
 0.980
EHR34657.1
PTS system, glucose-like IIB component.
  
 
 0.965
EHR32578.1
Hypothetical protein.
  
 
 0.965
EHR34392.1
Hypothetical protein.
   
 0.932
EHR33321.1
Hypothetical protein.
   
 0.932
EHR34413.1
Pullulanase, type I; Belongs to the glycosyl hydrolase 13 family.
 
 0.869
EHR31655.1
Hypothetical protein.
 
 
 0.863
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
 
 0.841
glgA
Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
 
 0.840
EHR32678.1
Pullulanase, type I; Belongs to the glycosyl hydrolase 13 family.
 
 
0.834
Your Current Organism:
Helcococcus kunzii
NCBI taxonomy Id: 883114
Other names: H. kunzii ATCC 51366, Helcococcus kunzii ATCC 51366
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