STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHR33317.1Hypothetical protein. (364 aa)    
Predicted Functional Partners:
EHR33318.1
Hypothetical protein.
     0.991
EHR36006.1
Hypothetical protein.
     0.932
EHR33316.1
Oligoendopeptidase F.
       0.734
EHR32601.1
1,3-beta-galactosyl-N-acetylhexosamine phosphorylase.
 
   
 0.705
EHR33234.1
Hypothetical protein.
  
 
  0.659
EHR35799.1
HAD hydrolase, family IB.
    
 0.657
EHR33297.1
Hypothetical protein.
   
 
  0.657
EHR35496.1
Cysteine synthase A.
    
  0.653
EHR33321.1
Hypothetical protein.
 
  
  0.645
def
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
    
  0.639
Your Current Organism:
Helcococcus kunzii
NCBI taxonomy Id: 883114
Other names: H. kunzii ATCC 51366, Helcococcus kunzii ATCC 51366
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.