STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHR32099.1Hypothetical protein. (250 aa)    
Predicted Functional Partners:
EHR32100.1
ParB-like partition protein; Belongs to the ParB family.
 
 0.999
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
 
 
 0.852
EHR32101.1
Hypothetical protein.
  
  
 0.837
EHR31820.1
Hypothetical protein.
  
 
 0.829
EHR31821.1
Hypothetical protein.
  
 
 0.829
EHR32102.1
Phosphate acetyltransferase.
       0.735
EHR34094.1
Hypothetical protein.
  
 
 0.705
EHR32696.1
LPXTG-domain-containing protein cell wall anchor domain.
  
 
 0.705
EHR32521.1
TQXA domain-containing protein.
  
 
 0.705
EHR32527.1
Hypothetical protein.
  
 
 0.705
Your Current Organism:
Helcococcus kunzii
NCBI taxonomy Id: 883114
Other names: H. kunzii ATCC 51366, Helcococcus kunzii ATCC 51366
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.