STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHR31627.1Trehalose operon repressor. (231 aa)    
Predicted Functional Partners:
EHR31626.1
PTS system, trehalose-specific IIBC component.
 
  
 0.895
EHR31625.1
Hypothetical protein.
 
  
 0.743
EHR32565.1
Hypothetical protein.
  
     0.740
EHR32298.1
Hypothetical protein.
  
     0.739
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
       0.735
EHR32351.1
Hypothetical protein.
  
     0.727
EHR32107.1
Hypothetical protein.
  
  
 0.647
EHR32578.1
Hypothetical protein.
 
  
 0.646
EHR31655.1
Hypothetical protein.
 
  
 0.563
EHR32350.1
Hypothetical protein.
 
 
 0.524
Your Current Organism:
Helcococcus kunzii
NCBI taxonomy Id: 883114
Other names: H. kunzii ATCC 51366, Helcococcus kunzii ATCC 51366
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.