STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHR31629.1Cof-like hydrolase. (280 aa)    
Predicted Functional Partners:
EHR33560.1
Cof-like hydrolase.
 
 
 
0.628
EHR35746.1
Cof-like hydrolase.
 
 
 
0.626
EHR35795.1
Cof-like hydrolase.
 
 
 
0.625
EHR32677.1
Cof-like hydrolase.
 
 
 
0.622
EHR34712.1
Cof-like hydrolase.
 
 
 
0.619
EHR32622.1
Cof-like hydrolase.
 
 
 
0.610
EHR34437.1
Riboflavin biosynthesis protein RibF; Belongs to the ribF family.
   
 0.600
EHR32308.1
Epoxide hydrolase domain-like phosphatase.
    
 0.570
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
  
    0.566
EHR35072.1
PTS system, mannose/fructose/sorbose family, IIA component.
    
 0.557
Your Current Organism:
Helcococcus kunzii
NCBI taxonomy Id: 883114
Other names: H. kunzii ATCC 51366, Helcococcus kunzii ATCC 51366
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