STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU79384.1Ni/Fe-hydrogenase, b-type cytochrome subunit. (237 aa)    
Predicted Functional Partners:
EKU79385.1
Hypothetical protein; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 
 0.998
EKU79386.1
Hydrogenase (NiFe) small subunit (hydA).
 
 
 0.998
EKU79383.1
Hydrogenase expression/formation protein.
 
  
 0.965
EKU79382.1
Hypothetical protein.
       0.788
EKU79119.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
   
  
 0.631
EKU78388.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
   
  
 0.631
EKU79387.1
Thioredoxin; Belongs to the thioredoxin family.
       0.450
hypA
Hydrogenase nickel insertion protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
   
 0.405
Your Current Organism:
Veillonella seminalis
NCBI taxonomy Id: 883156
Other names: V. seminalis ACS-216-V-Col6b, Veillonella ratti ACS-216-V-Col6b, Veillonella seminalis ACS-216-V-Col6b
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.