STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU79425.1Rod shape-determining protein MreD. (163 aa)    
Predicted Functional Partners:
EKU79426.1
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
 
 0.991
EKU79427.1
MreB/Mrl family cell shape determining protein.
  
  
 0.864
EKU79423.1
Hypothetical protein.
 
    0.848
EKU79424.1
Penicillin-binding protein 2.
 
  
 0.833
EKU78058.1
Hypothetical protein.
  
     0.765
EKU79292.1
Hypothetical protein.
  
     0.758
EKU79177.1
Hypothetical protein.
  
  
 0.747
EKU78872.1
Hypothetical protein.
  
     0.741
EKU79231.1
Hypothetical protein; Essential cell division protein.
  
  
 0.734
EKU77980.1
Hypothetical protein.
  
     0.721
Your Current Organism:
Veillonella seminalis
NCBI taxonomy Id: 883156
Other names: V. seminalis ACS-216-V-Col6b, Veillonella ratti ACS-216-V-Col6b, Veillonella seminalis ACS-216-V-Col6b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.