STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU79472.1Hydrolyase, tartrate beta subunit/fumarate domain-containing protein, Fe-S type. (205 aa)    
Predicted Functional Partners:
EKU79473.1
Hydrolyase, tartrate alpha subunit/fumarate domain-containing protein, Fe-S type.
 
 0.999
EKU79010.1
Hydrolyase, tartrate alpha subunit/fumarate domain-containing protein, Fe-S type.
 
 0.982
EKU78411.1
Hydrolyase, tartrate alpha subunit/fumarate domain-containing protein, Fe-S type.
 
 0.973
EKU78412.1
Hydrolyase, tartrate beta subunit/fumarate domain-containing protein, Fe-S type.
  
  
 
0.838
EKU77809.1
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
   
 
 0.810
EKU78060.1
Hypothetical protein.
    
 0.807
EKU78880.1
Hypothetical protein.
  
 
 0.802
EKU79006.1
Hypothetical protein.
   
 
  0.793
EKU79007.1
Formate acetyltransferase.
   
 
  0.793
EKU79441.1
glutaconyl-CoA decarboxylase subunit beta; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD).
    
  0.790
Your Current Organism:
Veillonella seminalis
NCBI taxonomy Id: 883156
Other names: V. seminalis ACS-216-V-Col6b, Veillonella ratti ACS-216-V-Col6b, Veillonella seminalis ACS-216-V-Col6b
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