STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU78698.1Succinate dehydrogenase or fumarate reductase, flavoprotein subunit. (572 aa)    
Predicted Functional Partners:
EKU78699.1
Succinate dehydrogenase and fumarate reductase iron-sulfur protein.
 
 0.998
EKU79119.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 0.993
EKU78388.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 0.993
EKU78700.1
Hypothetical protein.
 
 
 0.943
EKU78942.1
Aspartate ammonia-lyase.
 
  0.941
EKU78480.1
Hypothetical protein.
  
 0.825
EKU78989.1
2-oxoacid:acceptor oxidoreductase, alpha subunit.
   
 
 0.748
EKU79288.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.610
EKU78896.1
Hypothetical protein.
  
 0.579
atpA
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
   
  
 0.566
Your Current Organism:
Veillonella seminalis
NCBI taxonomy Id: 883156
Other names: V. seminalis ACS-216-V-Col6b, Veillonella ratti ACS-216-V-Col6b, Veillonella seminalis ACS-216-V-Col6b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.