STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU78777.1Hypothetical protein. (3077 aa)    
Predicted Functional Partners:
EKU79369.1
Hypothetical protein.
  
 
 0.834
EKU77468.1
Hypothetical protein.
  
 
 0.834
EKU77465.1
Hypothetical protein.
 
 
 
 0.823
EKU79370.1
Hypothetical protein.
  
 
 0.809
EKU77467.1
Hypothetical protein.
  
 
 0.809
EKU78794.1
PTS system, Fru family, IIC component.
   
 
  0.795
EKU77479.1
Hypothetical protein.
 
 
 
 0.760
EKU78770.1
Hypothetical protein.
    
  0.759
EKU78776.1
Hypothetical protein.
       0.732
EKU78772.1
Hypothetical protein.
       0.716
Your Current Organism:
Veillonella seminalis
NCBI taxonomy Id: 883156
Other names: V. seminalis ACS-216-V-Col6b, Veillonella ratti ACS-216-V-Col6b, Veillonella seminalis ACS-216-V-Col6b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.