STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU78807.1Propanediol dehydratase large subunit. (553 aa)    
Predicted Functional Partners:
EKU78808.1
Hypothetical protein.
 0.999
EKU78809.1
Hypothetical protein.
 
 0.999
EKU78806.1
Propanediol utilization protein PduB.
 
  
 0.973
EKU78811.1
Hypothetical protein.
 
  
 0.960
EKU78810.1
Hypothetical protein.
 
  
 0.945
EKU78819.1
Hypothetical protein.
 
 
 0.877
EKU78818.1
ATP:cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
 
  
 0.858
EKU78804.1
Hypothetical protein.
 
   
 0.758
EKU78805.1
Propanediol utilization protein PduA.
  
  
 0.728
EKU78812.1
Hypothetical protein.
  
  
 0.723
Your Current Organism:
Veillonella seminalis
NCBI taxonomy Id: 883156
Other names: V. seminalis ACS-216-V-Col6b, Veillonella ratti ACS-216-V-Col6b, Veillonella seminalis ACS-216-V-Col6b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.