STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU78884.1Hypothetical protein. (572 aa)    
Predicted Functional Partners:
EKU78885.1
Hypothetical protein.
       0.727
EKU77987.1
Hypothetical protein.
  
 
  0.651
EKU77972.1
Hypothetical protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.
  
  
  0.621
EKU77980.1
Hypothetical protein.
  
     0.582
EKU79334.1
Hypothetical protein.
  
 
 0.581
EKU77978.1
Hypothetical protein.
  
  
 0.578
EKU78872.1
Hypothetical protein.
  
     0.573
EKU77965.1
Hypothetical protein.
  
  
 0.564
EKU79292.1
Hypothetical protein.
 
     0.546
EKU77955.1
Hypothetical protein.
  
     0.541
Your Current Organism:
Veillonella seminalis
NCBI taxonomy Id: 883156
Other names: V. seminalis ACS-216-V-Col6b, Veillonella ratti ACS-216-V-Col6b, Veillonella seminalis ACS-216-V-Col6b
Server load: low (14%) [HD]