STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU78908.1Hypothetical protein. (641 aa)    
Predicted Functional Partners:
EKU77983.1
Hypothetical protein.
  
  
  0.792
EKU78498.1
Hypothetical protein.
  
     0.751
EKU78039.1
Hypothetical protein.
  
     0.732
EKU77963.1
Hypothetical protein.
  
     0.729
EKU78639.1
Hypothetical protein.
  
    0.713
EKU78372.1
Hypothetical protein.
  
     0.708
EKU77980.1
Hypothetical protein.
  
     0.708
EKU78369.1
Hypothetical protein.
  
     0.703
EKU77961.1
Hypothetical protein.
  
     0.688
EKU78920.1
Hypothetical protein.
  
 
   0.684
Your Current Organism:
Veillonella seminalis
NCBI taxonomy Id: 883156
Other names: V. seminalis ACS-216-V-Col6b, Veillonella ratti ACS-216-V-Col6b, Veillonella seminalis ACS-216-V-Col6b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.