STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU78928.1Hypothetical protein; Belongs to the 'phage' integrase family. (355 aa)    
Predicted Functional Partners:
EKU78930.1
Hypothetical protein.
 
    0.830
EKU78929.1
Hypothetical protein.
       0.741
EKU78932.1
Hypothetical protein.
 
    0.649
EKU78355.1
Hypothetical protein; Belongs to the 'phage' integrase family.
  
    0.542
EKU79119.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
  0.529
EKU78388.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
  0.529
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
  
    0.479
EKU78706.1
Hypothetical protein; Belongs to the 'phage' integrase family.
  
     0.445
EKU77768.1
comF family protein.
   
    0.410
Your Current Organism:
Veillonella seminalis
NCBI taxonomy Id: 883156
Other names: V. seminalis ACS-216-V-Col6b, Veillonella ratti ACS-216-V-Col6b, Veillonella seminalis ACS-216-V-Col6b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.