STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU79032.1Hypothetical protein. (159 aa)    
Predicted Functional Partners:
EKU78211.1
Hypothetical protein.
    
 0.837
EKU79033.1
Hypothetical protein.
      0.786
EKU78947.1
Thiamine biosynthesis protein ThiS.
    
 0.507
EKU79062.1
Hypothetical protein.
    
 0.503
EKU78407.1
Nitrate reductase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
 0.494
EKU79199.1
Hypothetical protein.
    
  0.486
EKU77876.1
Formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
  0.486
EKU78404.1
Nitrite transporter.
  
 
 0.482
EKU77526.1
Hypothetical protein.
  
 
 0.482
EKU78408.1
Nitrate reductase, beta subunit.
     
 0.474
Your Current Organism:
Veillonella seminalis
NCBI taxonomy Id: 883156
Other names: V. seminalis ACS-216-V-Col6b, Veillonella ratti ACS-216-V-Col6b, Veillonella seminalis ACS-216-V-Col6b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.