STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU79049.1Hypothetical protein. (536 aa)    
Predicted Functional Partners:
EKU79047.1
Hypothetical protein.
 
     0.889
EKU79048.1
Hypothetical protein.
 
     0.885
EKU79046.1
Hypothetical protein.
 
     0.884
EKU79045.1
Hypothetical protein.
 
     0.834
EKU79044.1
Sigma-70 family RNA polymerase sigma factor.
  
     0.771
EKU79043.1
Hypothetical protein.
  
     0.758
EKU79042.1
Tetracycline resistance protein tetW.
  
     0.729
EKU79037.1
Hypothetical protein.
    0.616
EKU79052.1
Hypothetical protein.
 
    0.531
EKU79050.1
Hypothetical protein.
 
     0.529
Your Current Organism:
Veillonella seminalis
NCBI taxonomy Id: 883156
Other names: V. seminalis ACS-216-V-Col6b, Veillonella ratti ACS-216-V-Col6b, Veillonella seminalis ACS-216-V-Col6b
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.