STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU79067.1Hypothetical protein. (493 aa)    
Predicted Functional Partners:
EKU79066.1
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 0.998
EKU79065.1
Hypothetical protein.
 0.995
rbsD
Hypothetical protein; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.947
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
  
 0.939
EKU78195.1
Hypothetical protein.
 
 0.925
EKU78197.1
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.896
EKU78075.1
Hypothetical protein.
 
 
 0.630
EKU78439.1
Hypothetical protein.
   
  
 0.494
EKU78794.1
PTS system, Fru family, IIC component.
      
 0.436
EKU79064.1
Hypothetical protein.
     
 0.416
Your Current Organism:
Veillonella seminalis
NCBI taxonomy Id: 883156
Other names: V. seminalis ACS-216-V-Col6b, Veillonella ratti ACS-216-V-Col6b, Veillonella seminalis ACS-216-V-Col6b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.