Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EKU78021.1 | guaA | HMPREF9282_01579 | HMPREF9282_01103 | Preprotein translocase, YajC subunit. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.480 |
| EKU78021.1 | tatA | HMPREF9282_01579 | HMPREF9282_00902 | Preprotein translocase, YajC subunit. | TatA/E family twin arginine-targeting protein translocase; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.417 |
| EKU78647.1 | EKU78940.1 | HMPREF9282_00444 | HMPREF9282_00737 | Hypothetical protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Hypothetical protein. | 0.604 |
| EKU78647.1 | guaA | HMPREF9282_00444 | HMPREF9282_01103 | Hypothetical protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.408 |
| EKU78647.1 | tatA | HMPREF9282_00444 | HMPREF9282_00902 | Hypothetical protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | TatA/E family twin arginine-targeting protein translocase; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.632 |
| EKU78647.1 | tatC | HMPREF9282_00444 | HMPREF9282_00262 | Hypothetical protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. | 0.408 |
| EKU78940.1 | EKU78647.1 | HMPREF9282_00737 | HMPREF9282_00444 | Hypothetical protein. | Hypothetical protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.604 |
| EKU78940.1 | EKU79106.1 | HMPREF9282_00737 | HMPREF9282_00903 | Hypothetical protein. | Hypothetical protein. | 0.426 |
| EKU78940.1 | guaA | HMPREF9282_00737 | HMPREF9282_01103 | Hypothetical protein. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.667 |
| EKU78940.1 | tatA | HMPREF9282_00737 | HMPREF9282_00902 | Hypothetical protein. | TatA/E family twin arginine-targeting protein translocase; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.645 |
| EKU78940.1 | tatC | HMPREF9282_00737 | HMPREF9282_00262 | Hypothetical protein. | Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. | 0.751 |
| EKU79106.1 | EKU78940.1 | HMPREF9282_00903 | HMPREF9282_00737 | Hypothetical protein. | Hypothetical protein. | 0.426 |
| EKU79106.1 | pgl | HMPREF9282_00903 | HMPREF9282_00901 | Hypothetical protein. | 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. | 0.471 |
| EKU79106.1 | tatA | HMPREF9282_00903 | HMPREF9282_00902 | Hypothetical protein. | TatA/E family twin arginine-targeting protein translocase; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.529 |
| guaA | EKU78021.1 | HMPREF9282_01103 | HMPREF9282_01579 | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | Preprotein translocase, YajC subunit. | 0.480 |
| guaA | EKU78647.1 | HMPREF9282_01103 | HMPREF9282_00444 | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | Hypothetical protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.408 |
| guaA | EKU78940.1 | HMPREF9282_01103 | HMPREF9282_00737 | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | Hypothetical protein. | 0.667 |
| guaA | tatA | HMPREF9282_01103 | HMPREF9282_00902 | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | TatA/E family twin arginine-targeting protein translocase; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.952 |
| guaA | trpF | HMPREF9282_01103 | HMPREF9282_00501 | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | Hypothetical protein; Belongs to the TrpF family. | 0.595 |
| guaA | zwf | HMPREF9282_01103 | HMPREF9282_00900 | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | Glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.441 |
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