STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU79126.1Hypothetical protein. (244 aa)    
Predicted Functional Partners:
EKU79125.1
Hypothetical protein.
       0.661
EKU79137.1
Hypothetical protein.
 
   
 0.660
EKU78366.1
Hypothetical protein.
 
     0.633
EKU79124.1
Hypothetical protein.
  
  
 0.612
EKU79123.1
Hypothetical protein.
 
     0.609
EKU78367.1
Hypothetical protein.
 
     0.608
EKU78681.1
Hypothetical protein.
 
     0.520
EKU79138.1
Hypothetical protein.
 
     0.511
EKU79144.1
Hypothetical protein.
 
    0.492
EKU79139.1
Hypothetical protein.
 
     0.487
Your Current Organism:
Veillonella seminalis
NCBI taxonomy Id: 883156
Other names: V. seminalis ACS-216-V-Col6b, Veillonella ratti ACS-216-V-Col6b, Veillonella seminalis ACS-216-V-Col6b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.