STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU79143.1Hypothetical protein. (94 aa)    
Predicted Functional Partners:
EKU79144.1
Hypothetical protein.
 
     0.949
EKU79142.1
Hypothetical protein.
 
     0.865
EKU79139.1
Hypothetical protein.
 
     0.859
EKU79138.1
Hypothetical protein.
 
     0.857
EKU79137.1
Hypothetical protein.
 
     0.853
EKU79145.1
Hypothetical protein.
       0.773
EKU79146.1
Hypothetical protein.
       0.773
EKU79147.1
Hypothetical protein.
       0.671
EKU78365.1
Hypothetical protein.
 
     0.556
EKU78681.1
Hypothetical protein.
  
     0.551
Your Current Organism:
Veillonella seminalis
NCBI taxonomy Id: 883156
Other names: V. seminalis ACS-216-V-Col6b, Veillonella ratti ACS-216-V-Col6b, Veillonella seminalis ACS-216-V-Col6b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.