STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU79174.1Hypothetical protein. (173 aa)    
Predicted Functional Partners:
EKU79173.1
Hypothetical protein.
       0.757
EKU79175.1
Hypothetical protein.
       0.618
EKU79163.1
Phage tail tape measure protein, TP901 family, core region.
 
    0.564
EKU78018.1
SpoIID/LytB domain-containing protein.
 
 
 0.551
EKU77690.1
N-acetylmuramoyl-L-alanine amidase CwlD.
  
  
 
0.528
EKU79171.1
Hypothetical protein.
       0.472
EKU77443.1
Hypothetical protein.
 
  
 0.451
EKU77988.1
Hypothetical protein.
  
 
 0.435
EKU77469.1
TonB family domain-containing protein.
  
 
  0.429
EKU79164.1
Hypothetical protein.
 
  
 0.410
Your Current Organism:
Veillonella seminalis
NCBI taxonomy Id: 883156
Other names: V. seminalis ACS-216-V-Col6b, Veillonella ratti ACS-216-V-Col6b, Veillonella seminalis ACS-216-V-Col6b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.