STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU78435.1Mutator mutT protein. (132 aa)    
Predicted Functional Partners:
EKU78434.1
Hypothetical protein.
 
   
 0.931
EKU79119.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
 0.659
EKU78388.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
 0.659
EKU79111.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
  0.654
cinA
Competence/damage-inducible protein CinA domain; Belongs to the CinA family.
    
  0.645
EKU78567.1
Methionine synthase.
    
 0.566
EKU77666.1
Hypothetical protein.
    
  0.502
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.500
EKU77789.1
Hypothetical protein.
  
 
 0.429
folE
GTP cyclohydrolase I.
  
 
 0.420
Your Current Organism:
Veillonella seminalis
NCBI taxonomy Id: 883156
Other names: V. seminalis ACS-216-V-Col6b, Veillonella ratti ACS-216-V-Col6b, Veillonella seminalis ACS-216-V-Col6b
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.