STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU78217.1Hypothetical protein; Belongs to the LysR transcriptional regulatory family. (294 aa)    
Predicted Functional Partners:
EKU78175.1
Hypothetical protein; Belongs to the LysR transcriptional regulatory family.
  
     0.746
EKU78164.1
Hypothetical protein; Belongs to the LysR transcriptional regulatory family.
  
     0.743
EKU78218.1
Hypothetical protein.
 
    0.689
EKU78219.1
Hypothetical protein.
 
    0.564
EKU79074.1
Hypothetical protein; Belongs to the LysR transcriptional regulatory family.
  
     0.488
EKU78211.1
Hypothetical protein.
  
  
 0.462
EKU78439.1
Hypothetical protein.
  
   
 0.425
EKU78386.1
Hypothetical protein; Belongs to the LysR transcriptional regulatory family.
  
     0.417
Your Current Organism:
Veillonella seminalis
NCBI taxonomy Id: 883156
Other names: V. seminalis ACS-216-V-Col6b, Veillonella ratti ACS-216-V-Col6b, Veillonella seminalis ACS-216-V-Col6b
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.