STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU78268.1Hypothetical protein; Belongs to the bacterial solute-binding protein 3 family. (271 aa)    
Predicted Functional Partners:
EKU78269.1
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region.
 0.997
EKU77759.1
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region.
 0.986
EKU78270.1
Hypothetical protein.
 
 0.951
EKU77758.1
Hypothetical protein.
 
 0.897
EKU78271.1
Hypothetical protein.
       0.462
EKU78267.1
Hypothetical protein.
       0.453
EKU78211.1
Hypothetical protein.
  
  
 0.444
EKU78126.1
uroporphyrinogen-III C-methyltransferase.
   
 
  0.434
aroK-3
Chorismate mutase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
     
 0.422
EKU78272.1
Hypothetical protein.
  
 
 0.409
Your Current Organism:
Veillonella seminalis
NCBI taxonomy Id: 883156
Other names: V. seminalis ACS-216-V-Col6b, Veillonella ratti ACS-216-V-Col6b, Veillonella seminalis ACS-216-V-Col6b
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.