STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU78330.1Hypothetical protein. (617 aa)    
Predicted Functional Partners:
EKU78340.1
Phage major tail tube protein.
 
  
 0.972
EKU78339.1
Hypothetical protein.
 
  
 0.970
EKU78332.1
Lambda family phage portal protein.
 
  
 0.957
EKU78333.1
HK97 family phage prohead protease.
 
    0.950
EKU78334.1
Hypothetical protein.
 
    0.946
EKU78348.1
Hypothetical protein.
 
  
 0.935
EKU78349.1
Phage tail protein I.
 
  
 0.934
EKU78343.1
Hypothetical protein.
 
    0.933
EKU78344.1
Hypothetical protein.
 
  
 0.926
EKU78346.1
Hypothetical protein.
 
    0.925
Your Current Organism:
Veillonella seminalis
NCBI taxonomy Id: 883156
Other names: V. seminalis ACS-216-V-Col6b, Veillonella ratti ACS-216-V-Col6b, Veillonella seminalis ACS-216-V-Col6b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.