STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU78333.1HK97 family phage prohead protease. (629 aa)    
Predicted Functional Partners:
EKU78332.1
Lambda family phage portal protein.
 
    0.953
EKU78334.1
Hypothetical protein.
 
    0.952
clpX
ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.
  
 0.951
EKU78330.1
Hypothetical protein.
 
    0.950
EKU77496.1
Hypothetical protein; Belongs to the ClpA/ClpB family.
   
 
 0.916
EKU78339.1
Hypothetical protein.
 
     0.907
EKU78340.1
Phage major tail tube protein.
 
     0.902
EKU78348.1
Hypothetical protein.
 
     0.803
EKU78344.1
Hypothetical protein.
 
     0.799
EKU78349.1
Phage tail protein I.
 
     0.793
Your Current Organism:
Veillonella seminalis
NCBI taxonomy Id: 883156
Other names: V. seminalis ACS-216-V-Col6b, Veillonella ratti ACS-216-V-Col6b, Veillonella seminalis ACS-216-V-Col6b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.