STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU78346.1Hypothetical protein. (149 aa)    
Predicted Functional Partners:
EKU78343.1
Hypothetical protein.
 
 
 0.997
EKU78348.1
Hypothetical protein.
 
 
 0.997
EKU78347.1
Hypothetical protein.
 
 
 0.996
EKU78349.1
Phage tail protein I.
 
 
 0.993
EKU78344.1
Hypothetical protein.
 
  
 0.990
EKU78340.1
Phage major tail tube protein.
 
   0.987
EKU78345.1
Phage baseplate assembly protein V.
 
  
 0.983
EKU78339.1
Hypothetical protein.
 
   0.981
EKU78350.1
Hypothetical protein.
 
  
 0.978
EKU78342.1
Phage tail tape measure protein, TP901 family, core region.
 
    0.950
Your Current Organism:
Veillonella seminalis
NCBI taxonomy Id: 883156
Other names: V. seminalis ACS-216-V-Col6b, Veillonella ratti ACS-216-V-Col6b, Veillonella seminalis ACS-216-V-Col6b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.