STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU78211.1Hypothetical protein. (1544 aa)    
Predicted Functional Partners:
EKU78533.1
Glutamate synthase (NADPH), homotetrameric.
 0.999
EKU77884.1
Glutamate synthase (NADPH), homotetrameric.
 0.999
EKU78907.1
Hypothetical protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.998
EKU77601.1
Hypothetical protein; Belongs to the glutamine synthetase family.
  
 
 0.984
EKU79119.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 
 0.972
EKU78388.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 
 0.972
leuB
3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.
 
 
 0.970
carB
Carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family.
  
 
 0.969
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.
  
 
 0.968
EKU77666.1
Hypothetical protein.
    
 0.966
Your Current Organism:
Veillonella seminalis
NCBI taxonomy Id: 883156
Other names: V. seminalis ACS-216-V-Col6b, Veillonella ratti ACS-216-V-Col6b, Veillonella seminalis ACS-216-V-Col6b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.