Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EKU77696.1 | EKU77835.1 | HMPREF9282_01914 | HMPREF9282_01650 | Hypothetical protein. | 1A family penicillin-binding protein. | 0.619 |
| EKU77696.1 | EKU78122.1 | HMPREF9282_01914 | HMPREF9282_01403 | Hypothetical protein. | DivIVA domain-containing protein. | 0.761 |
| EKU77696.1 | EKU78460.1 | HMPREF9282_01914 | HMPREF9282_01077 | Hypothetical protein. | Hypothetical protein. | 0.619 |
| EKU77696.1 | sepF | HMPREF9282_01914 | HMPREF9282_01400 | Hypothetical protein. | Hypothetical protein; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | 0.685 |
| EKU77835.1 | EKU77696.1 | HMPREF9282_01650 | HMPREF9282_01914 | 1A family penicillin-binding protein. | Hypothetical protein. | 0.619 |
| EKU77835.1 | EKU78122.1 | HMPREF9282_01650 | HMPREF9282_01403 | 1A family penicillin-binding protein. | DivIVA domain-containing protein. | 0.829 |
| EKU77835.1 | EKU78460.1 | HMPREF9282_01650 | HMPREF9282_01077 | 1A family penicillin-binding protein. | Hypothetical protein. | 0.751 |
| EKU77835.1 | EKU79426.1 | HMPREF9282_01650 | HMPREF9282_00234 | 1A family penicillin-binding protein. | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | 0.512 |
| EKU78118.1 | EKU78121.1 | HMPREF9282_01399 | HMPREF9282_01402 | YggS family pyridoxal phosphate enzyme; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | Hypothetical protein. | 0.740 |
| EKU78118.1 | EKU78122.1 | HMPREF9282_01399 | HMPREF9282_01403 | YggS family pyridoxal phosphate enzyme; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | DivIVA domain-containing protein. | 0.887 |
| EKU78118.1 | hemC | HMPREF9282_01399 | HMPREF9282_01406 | YggS family pyridoxal phosphate enzyme; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.410 |
| EKU78118.1 | proC | HMPREF9282_01399 | HMPREF9282_01401 | YggS family pyridoxal phosphate enzyme; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.839 |
| EKU78118.1 | sepF | HMPREF9282_01399 | HMPREF9282_01400 | YggS family pyridoxal phosphate enzyme; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | Hypothetical protein; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | 0.954 |
| EKU78121.1 | EKU78118.1 | HMPREF9282_01402 | HMPREF9282_01399 | Hypothetical protein. | YggS family pyridoxal phosphate enzyme; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | 0.740 |
| EKU78121.1 | EKU78122.1 | HMPREF9282_01402 | HMPREF9282_01403 | Hypothetical protein. | DivIVA domain-containing protein. | 0.801 |
| EKU78121.1 | hemC | HMPREF9282_01402 | HMPREF9282_01406 | Hypothetical protein. | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.456 |
| EKU78121.1 | proC | HMPREF9282_01402 | HMPREF9282_01401 | Hypothetical protein. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.807 |
| EKU78121.1 | sepF | HMPREF9282_01402 | HMPREF9282_01400 | Hypothetical protein. | Hypothetical protein; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | 0.931 |
| EKU78122.1 | EKU77696.1 | HMPREF9282_01403 | HMPREF9282_01914 | DivIVA domain-containing protein. | Hypothetical protein. | 0.761 |
| EKU78122.1 | EKU77835.1 | HMPREF9282_01403 | HMPREF9282_01650 | DivIVA domain-containing protein. | 1A family penicillin-binding protein. | 0.829 |
page 1 of 3