STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU78137.1Hypothetical protein. (836 aa)    
Predicted Functional Partners:
EKU78138.1
Hypothetical protein.
 
    
0.839
EKU78216.1
Hypothetical protein.
  
  
  0.769
EKU78289.1
Hypothetical protein.
  
  
  0.768
EKU78485.1
Hypothetical protein.
  
  
  0.762
EKU78214.1
Hypothetical protein.
 
     0.759
EKU78291.1
Hypothetical protein.
  
     0.754
EKU77379.1
Hypothetical protein.
  
     0.744
EKU78369.1
Hypothetical protein.
  
     0.734
EKU78035.1
Hypothetical protein.
  
     0.725
EKU78498.1
Hypothetical protein.
  
     0.722
Your Current Organism:
Veillonella seminalis
NCBI taxonomy Id: 883156
Other names: V. seminalis ACS-216-V-Col6b, Veillonella ratti ACS-216-V-Col6b, Veillonella seminalis ACS-216-V-Col6b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.