STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU77898.1Hypothetical protein. (284 aa)    
Predicted Functional Partners:
EKU77899.1
Hypothetical protein.
 
     0.736
EKU77900.1
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
       0.693
EKU77897.1
Threonine synthase.
 
     0.633
EKU78920.1
Hypothetical protein.
  
     0.563
EKU79094.1
Hypothetical protein.
  
     0.505
EKU79425.1
Rod shape-determining protein MreD.
  
     0.491
EKU78002.1
Hypothetical protein.
  
     0.466
EKU79177.1
Hypothetical protein.
  
     0.448
EKU78480.1
Hypothetical protein.
  
     0.425
EKU77901.1
Hypothetical protein.
       0.423
Your Current Organism:
Veillonella seminalis
NCBI taxonomy Id: 883156
Other names: V. seminalis ACS-216-V-Col6b, Veillonella ratti ACS-216-V-Col6b, Veillonella seminalis ACS-216-V-Col6b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.