STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU77914.1Thiol reductant ABC exporter, CydD subunit. (1223 aa)    
Predicted Functional Partners:
EKU79481.1
Cytochrome d ubiquinol oxidase, subunit II.
 
  
 0.992
EKU79482.1
Hypothetical protein.
 
  
 0.988
EKU77913.1
Hypothetical protein.
 
     0.667
EKU77624.1
Hypothetical protein.
 
 
 
0.647
EKU77971.1
Lipid A export permease/ATP-binding protein MsbA.
 
 
 
0.635
EKU77623.1
Hypothetical protein.
 
 
 
0.635
EKU78675.1
Hypothetical protein.
 
 
 
0.621
EKU78676.1
Hypothetical protein.
 
 
 
0.617
EKU78407.1
Nitrate reductase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
  
 0.540
EKU78699.1
Succinate dehydrogenase and fumarate reductase iron-sulfur protein.
  
  
 0.475
Your Current Organism:
Veillonella seminalis
NCBI taxonomy Id: 883156
Other names: V. seminalis ACS-216-V-Col6b, Veillonella ratti ACS-216-V-Col6b, Veillonella seminalis ACS-216-V-Col6b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.