STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU77955.1Hypothetical protein. (487 aa)    
Predicted Functional Partners:
EKU78519.1
Hypothetical protein.
 
 0.975
EKU77513.1
Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.943
EKU78546.1
Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.936
EKU77954.1
Virulence factor Mce family protein.
 
   
 0.935
EKU77514.1
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.927
EKU77827.1
Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.918
EKU78213.1
Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.908
EKU78545.1
Hypothetical protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 0.902
EKU77959.1
Outer membrane protein assembly complex, YaeT protein.
 
   
 0.867
EKU77952.1
Hypothetical protein; Belongs to the MlaE permease family.
 
     0.846
Your Current Organism:
Veillonella seminalis
NCBI taxonomy Id: 883156
Other names: V. seminalis ACS-216-V-Col6b, Veillonella ratti ACS-216-V-Col6b, Veillonella seminalis ACS-216-V-Col6b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.