STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU77979.1Hypothetical protein. (179 aa)    
Predicted Functional Partners:
EKU77981.1
Hypothetical protein.
  
 0.998
EKU77980.1
Hypothetical protein.
 
 
 0.995
EKU77982.1
Hypothetical protein.
 
 
 0.986
EKU77978.1
Hypothetical protein.
 
     0.894
EKU77977.1
YrbI family 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase.
  
  
 0.863
EKU79292.1
Hypothetical protein.
 
  
 0.852
EKU77976.1
KpsF/GutQ family sugar isomerase; Belongs to the SIS family. GutQ/KpsF subfamily.
  
  
 0.840
EKU77983.1
Hypothetical protein.
 
     0.811
EKU77961.1
Hypothetical protein.
 
     0.798
EKU77956.1
Hypothetical protein.
 
     0.796
Your Current Organism:
Veillonella seminalis
NCBI taxonomy Id: 883156
Other names: V. seminalis ACS-216-V-Col6b, Veillonella ratti ACS-216-V-Col6b, Veillonella seminalis ACS-216-V-Col6b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.