STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU77869.1Hypothetical protein. (251 aa)    
Predicted Functional Partners:
EKU78218.1
Hypothetical protein.
     0.935
EKU78567.1
Methionine synthase.
   
 0.839
EKU77868.1
Hypothetical protein.
       0.773
EKU78897.1
Threonine dehydratase.
   
 
  0.717
EKU78819.1
Hypothetical protein.
   
 0.652
EKU78158.1
Hypothetical protein.
  
 
 0.598
EKU79188.1
Hypothetical protein.
   
 0.586
EKU77867.1
Hypothetical protein.
  
 
 0.575
EKU77904.1
Hypothetical protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 0.563
EKU78619.1
Cysteine synthase.
  
 0.561
Your Current Organism:
Veillonella seminalis
NCBI taxonomy Id: 883156
Other names: V. seminalis ACS-216-V-Col6b, Veillonella ratti ACS-216-V-Col6b, Veillonella seminalis ACS-216-V-Col6b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.